Jens Petersen
Lektor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- Udgivet
A Cross-Center Smoothness Prior for Variational Bayesian Brain Tissue Segmentation
Kouw, W. M., Ørting, S. N., Petersen, Jens, Steenstrup Pedersen, Kim & de Bruijne, Marleen, 1 jan. 2019, Information Processing in Medical Imaging : 26th International Conference, IPMI 2019, Proceedings. Bao, S., Chung, A. C. S., Gee, J. C. & Yushkevich, P. A. (red.). Springer, s. 360-371 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 11492 LNCS).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
A hierarchical scheme for geodesic anatomical labeling of airway trees
Feragen, A., Petersen, Jens, Owen, M., Lo, P. C. P., Thomsen, L., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2012, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III. Ayache, N., Delingette, H., Golland, P. & Mori, K. (red.). Springer, s. 147-155 9 s. (Lecture notes in computer science, Bind 7512).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Airway distensibility in chronic obstructive pulmonary disease – evaluation by CT airway segmentation and lung density measurement based on the Danish lung cancer screening trial
M. W. Wille, M., Petersen, Jens, Dirksen, A., Pedersen, J. J. H. & de Bruijne, Marleen, 2013, I: American Journal of Respiratory and Critical Care Medicine. 187, s. A2871 1 s.Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning › fagfællebedømt
- Udgivet
An automatic system for segmentation, matching, anatomical labeling and measurement of airways from CT images
Petersen, Jens, Feragen, A., Owen, M., Lo, P., Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013. 1 s.Publikation: Konferencebidrag › Poster › Forskning › fagfællebedømt
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Analysis of airways in computed tomography
Petersen, Jens, 2014, Department of Computer Science, Faculty of Science, University of Copenhagen. 135 s.Publikation: Bog/antologi/afhandling/rapport › Ph.d.-afhandling › Forskning
- Udgivet
Automated quantification of bronchiectasis, airway wall thickening and lumen tapering in chest CT
Perez-Rovira, A., Kuo, W., Petersen, Jens, A.W.M. Tiddens, H. & de Bruijne, Marleen, 2015. 1 s.Publikation: Konferencebidrag › Konferenceabstrakt til konference › Forskning › fagfællebedømt
- Udgivet
Automatic airway-artery analysis on lung CT to quantify airway wall thickening and bronchiectasis
Perez-Rovira, A., Kuo, W., Petersen, Jens, Tiddens, H. A. W. M. & de Bruijne, Marleen, 2016, I: Medical Physics. 43, 10, s. 5736-5744 9 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
Carotid artery lumen segmentation in 3D free-hand ultrasound images using surface graph cuts
Lorza, A. M. A., Carvalho, D. D. B., Petersen, Jens, Dijk, A. C. V., Lugt, A. V. D., Niessen, W. J., Klein, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (red.). Springer, s. 542-549 8 s. (Lecture notes in computer science, Bind 8150).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Carotid artery wall segmentation by coupled surface graph cuts
Arias, A., Petersen, Jens, van Engelen, A., Tang, H., Selwaness, M., Witteman, J. C. M., van der Lugt, A., Niessen, W. & de Bruijne, Marleen, 2013, Medical Computer Vision. Recognition techniques and applications in medical imaging: Second International MICCAI Workshop, MCV 2012, Nice, France, Revised Selected Papers. Menze, B. H., Langs, G., Lu, L., Montillo, A., Tu, Z. & Criminisi, A. (red.). Springer, s. 38-47 10 s. (Lecture notes in computer science, Bind 7766).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Carotid artery wall segmentation in multispectral MRI by coupled optimal surface graph cuts
Arias-Lorza, A. M., Petersen, Jens, van Engelen, A., Selwaness, M., van der Lugt, A., J. Niessen, W. & de Bruijne, Marleen, 2016, I: IEEE Transactions on Medical Imaging. 35, 3, s. 901-911 11 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
Chronic Obstructive Pulmonary Disease Quantification Using CT Texture Analysis and Densitometry: Results From the Danish Lung Cancer Screening Trial
Sørensen, L., Nielsen, Mads, Petersen, Jens, Pedersen, J. H., Dirksen, A. & de Bruijne, Marleen, 2020, I: American Journal of Roentgenology. 214, 6, s. 1269-1279Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
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Crowdsourced emphysema assessment
Ørting, S. N., Cheplygina, V., Petersen, Jens, Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 2017, Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and Second International Workshop, LABELS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Lee, S-L., Cheplygina, V., Balocco, S., Mateus, D., Zahnd, G., Maier-Hein, L., Dermirci, S., Granger, E., Duong, L., Carbonneau, M-A., Albarquoni, S. & Carneiro, G. (red.). Springer, s. 126-135 10 s. (Lecture notes in computer science, Bind 10552).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Detecting emphysema with multiple instance learning
Orting, S. N., Petersen, Jens, Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 23 maj 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE, s. 510-513Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Jimenez-Solem, E., Petersen, T. S., Hansen, C., Hansen, C., Lioma, C., Igel, C., Boomsma, W., Krause, O., Lorenzen, S., Selvan, R., Petersen, J., Nyeland, M. E., Ankarfeldt, M. Z., Virenfeldt, G. M., Winther-Jensen, M., Linneberg, A., Ghazi, M. M., Detlefsen, N., Lauritzen, A. D., Smith, A. G. & 15 flere, , 2021, I: Scientific Reports. 11, 1, 12 s., 3246.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
Diagnosis of bronchiectasis and airway wall thickening in children with cystic fibrosis: objective airway-artery quantification
Kuo, W., de Bruijne, Marleen, Petersen, Jens, Nasserinejad, K., Ozturk, H., Chen, Y., Perez-Rovira, A. & Tiddens, H. A. W. M., nov. 2017, I: European Radiology. 27, 11, s. 4680-4689 10 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
Dissimilarity-based classification of anatomical tree structures
Sørensen, L., Lo, P. C. P., Dirksen, A., Petersen, Jens & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (red.). Springer, s. 475-485 11 s. (Lecture notes in computer science, Bind 6801).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation
Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, A., Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, I: European Radiology. 24, 9, s. 2319-2325 7 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
Emphysema progression is visually detectable in low-dose CT in continuous but not in former smokers
Wille, M. M. W., Thomsen, L. H., Dirksen, A., Petersen, Jens, Pedersen, J. J. H. & Shaker, S. B., 2014, I: European Radiology. 24, 11, s. 2692-2699 8 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
- Udgivet
Extracting tree structures in CT data by tracking multiple statistically ranked hypotheses
Selvan, Raghav, Petersen, Jens, Pedersen, J. H. & de Bruijne, Marleen, 18 okt. 2019, I: Medical Physics. 46, 10, s. 4431-4440Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
- Udgivet
Extraction of Airways using Graph Neural Networks
Selvan, Raghav, Kipf, T., Welling, M., Pedersen, J. J. H., Petersen, Jens & de Bruijne, Marleen, 2018. 3 s.Publikation: Konferencebidrag › Konferenceabstrakt til konference › Forskning › fagfællebedømt
- Udgivet
Extraction of Airways with Probabilistic State-Space Models and Bayesian Smoothing
Selvan, Raghav, Petersen, Jens, Pedersen, J. J. H. & de Bruijne, Marleen, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Ferrante, E., Pennec, X., Dalca, A. V., Parisot, S., Joshi, S., Batmanghelich, N. K., Sotiras, A., Nielsen, M., Sabuncu, M. R., Fletcher, T., Shen, L., Durrleman, S. & Sommer, S. (red.). Springer, s. 53-63 (Lecture notes in computer science, Bind 10551).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Extraction of airway trees using multiple hypothesis tracking and template matching
Selvan, Raghav, Petersen, Jens, Pedersen, J. J. H. & de Bruijne, Marleen, 2016, The Sixth International Workshop on Pulmonary Image Analysis: Athens, Greece - October 21, 2016. Beichel, R. R., Farahani, K., Jacobs, C., Kabus, S., Kiraly, A. P., Kuhnigk, J-M., McClelland, J. R., Mori, K., Petersen, J. & Rit, S. (red.). Create Space Independent Publishing Platform, s. 43-54 12 s.Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Feature Learning Based on Visual Similarity Triplets in Medical Image Analysis: A Case Study of Emphysema in Chest CT Scans
Nyboe Ørting, S., Petersen, Jens, Cheplygina, V., Thomsen, L. H., Wille, M. M. W. & de Bruijne, Marleen, 2018, Intravascular Imaging and Computer Assisted Stenting and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 7th Joint International Workshop, CVII-STENT 2018 and Third International Workshop, LABELS 2018 Held in Conjunction with MICCAI 2018 Granada, Spain, September 16, 2018 Proceedings. Stoyanov, D., Taylor, Z., Balocco, S. & Sznitman, R. (red.). Springer, s. 140-149 Chapter 16. (Lecture Notes in Computer Science, Bind 11043).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Geodesic atlas-based labeling of anatomical trees: application and evaluation on airways extracted from CT
Feragen, A., Petersen, Jens, Owen, M., Lo, P., Thomsen, L. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2015, I: IEEE Transactions on Medical Imaging. 34, 6, s. 1212-1226 15 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
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Geometric tree kernels: classification of COPD from airway tree geometry
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A hierarchical scheme for geodesic anatomical labeling of airway trees
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Quantitative airway analysis in longitudinal studies using groupwise registration and 4D optimal surfaces
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